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Whose pollution is it anyway? Project will use bacteriophages to point the finger

January 5, 2026
in Water
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An ambitious interdisciplinary project is aiming to develop and test a first-of-its-kind tool which can trace the sources of pollution in UK water bodies. By addressing the long-standing challenge of reliably distinguishing human faecal contamination from agricultural or wildlife sources, such a tool would provide a key missing ingredient in the effort to develop a robust regulatory regime in relation to sewage pollution in rivers

Funded by the Natural Environment Research Council (NERC), the three-year project brings together an interdisciplinary team of experts, led by the University of Brighton, in a bid to develop the tool, which would be used to trace the sources of pollution in UK water bodies, including rivers, lakes, and streams used for drinking water supply and for recreational activities.

By using advanced DNA sequencing technology, scientists can search samples for bacteriophages, which are viruses that infect bacteria and are naturally found in the human gut and faeces.

The new portable diagnostic technology envisaged by the project’s creators would enable scientists to collect and analyse water samples both in the field and in the laboratory. This would be a major improvement on the traditional water testing technology which relies on culturing bacteria in laboratories, a process that is slow and fails to reveal the presence of human contamination.

Currently, no river in England meets the “good chemical status” set by the Water Framework Directive, the internationally recognised standard which regulates the quality of water bodies across Europe. Pollutants found in sewage and industrial discharges or produced by agricultural and wild animals continue to impact water purity, leaving only 16% of English rivers classified as being of “good ecological status.”

Led by researchers at University of Brighton Centre for Environment and Society, the £950,000-project sets out to allow scientists and regulators to rapidly, accurately and cost-effectively trace human contamination to its source, helping target interventions, improve the ecological health of freshwater systems, and reduce risks to public health.

The tool is being developed in collaboration with partners from the University of Bath and University of Sheffield, working alongside the Environment Agency and other regional water service providers.

Dr Sarah Purnell, Environmental Microbiologist at the University of Brighton, said: “This project aims to significantly improve how we monitor water quality. By using advanced DNA sequencing and bacteriophage diagnostics, we aim to deliver a tool that can quickly and accurately identify human faecal pollution. This will help regulators and communities make decisions to protect water resources and public health.”

Professor James Ebdon, Co-Investigator at the University of Brighton’s Environment and Public Health Research Group, added: “This project is particularly exciting as it gives us an opportunity to use the latest biomolecular tools to advance an area of water quality management known as Microbial Source Tracking (MST) that our researchers have been trying to resolve for the past 25 years.”

Once developed, the plan is that the technology will be implemented and tested by experts at the Environment Agency and the University of Sheffield on the River Wharfe in Yorkshire, home to England’s first inland designated bathing site at Ilkley, which has faced water quality challenges linked to sewage and runoff.

 

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